Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 AC011755.1-201ENST00000623763 2049 ntBASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BBS1Q8NFJ9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 CASC19-221ENST00000641309 1382 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 RNA5SP394-201ENST00000364216 119 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 RNA5SP105-201ENST00000391123 113 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL136131.1-201ENST00000406079 803 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 COX5BP7-201ENST00000414780 274 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 OR13Z1P-201ENST00000416141 834 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL035551.1-201ENST00000446931 348 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL035090.1-201ENST00000454835 332 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 ACA64.1-201ENST00000459171 127 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AP000942.1-201ENST00000463969 747 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AP000797.2-201ENST00000475768 606 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 FAM106CP-201ENST00000582212 507 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 AC015908.5-201ENST00000623289 343 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
BBS1Q8NFJ9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
BBS1Q8NFJ9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 SMG1P6-201ENST00000532337 2930 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 TCP1P3-201ENST00000414406 1498 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 OR9G4-201ENST00000302957 984 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 RNU1-65P-201ENST00000363919 148 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 SNORA48.4-201ENST00000391089 134 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC004386.1-201ENST00000393214 761 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 RAB5CP1-201ENST00000395972 580 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 RPL21P67-201ENST00000402896 478 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC066692.1-201ENST00000421721 457 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC090018.1-201ENST00000434369 367 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC110602.1-201ENST00000437414 318 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC099063.2-201ENST00000446360 662 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 HLA-DPA3-207ENST00000454398 229 ntBASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BBS1Q8NFJ9 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms