Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 RBPJP2-201ENST00000618187 1444 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC133552.1-201ENST00000569988 4007 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 HSPA8P15-201ENST00000401676 786 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL445213.1-201ENST00000412589 747 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC094085.1-201ENST00000468914 584 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC090589.1-201ENST00000473109 362 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 OR11I1P-201ENST00000486033 954 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC138866.2-201ENST00000508650 584 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC138938.1-201ENST00000515431 782 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AC007683.2-201ENST00000624681 714 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 ICE2P1-201ENST00000512800 1849 ntBASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC50Q8IVM0 AL022393.1-201ENST00000625142 1677 ntBASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC50Q8IVM0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC100778.3-201ENST00000580060 1750 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 OR4G1P-202ENST00000641173 1788 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 RNA5SP122-201ENST00000384457 108 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AL050305.1-201ENST00000399993 1230 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 RNU2-18P-201ENST00000411224 162 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 MTND6P12-201ENST00000428247 522 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AL138899.2-201ENST00000439139 499 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 RPS24P16-201ENST00000497294 392 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 PSMA2P2-201ENST00000504319 686 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 BTG4P1-201ENST00000510421 183 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 HMGB1P19-201ENST00000517578 577 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 OR10D4P-201ENST00000525892 951 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC078878.1-201ENST00000539832 958 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC005341.1-201ENST00000571086 708 ntBASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC50Q8IVM0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 OR13C1P-202ENST00000641378 2919 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms