Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHFQ7M4L6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.13□□□□□ -1.59
SHFQ7M4L6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC018809.2-201ENST00000602436 3823 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 MIR130A-201ENST00000385274 89 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 RNA5SP431-201ENST00000410312 120 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 OR13Z1P-201ENST00000416141 834 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 MTCYBP7-201ENST00000419540 1134 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 THEM7P-201ENST00000419556 672 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 GAPDHP48-201ENST00000436626 961 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 SNRPFP2-201ENST00000440710 251 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AL353898.1-201ENST00000444055 238 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC093166.4-201ENST00000457867 318 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC098847.1-201ENST00000473094 348 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 RBBP4P1-201ENST00000502424 1276 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 GOLGA5P1-201ENST00000507317 980 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC074255.1-201ENST00000511259 501 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 IGLV3-30-201ENST00000524362 298 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AP003396.4-201ENST00000527574 265 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AP003066.2-201ENST00000529375 555 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 OR4A41P-201ENST00000533053 928 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC139697.1-201ENST00000548429 745 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 RPA2P1-201ENST00000556557 721 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AGGF1P9-201ENST00000561884 913 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC090666.1-201ENST00000578241 445 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 DHFRP1-201ENST00000579682 559 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AP005119.1-201ENST00000580956 292 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 CBX3P2-202ENST00000583365 535 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 EIF1P5-201ENST00000585002 234 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC090236.2-201ENST00000587933 1101 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 COX6CP7-201ENST00000597056 208 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 AC093849.1-201ENST00000563631 2209 ntBASIC5.12□□□□□ -1.59
SHFQ7M4L6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SHFQ7M4L6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHFQ7M4L6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RNU6-252P-201ENST00000363232 107 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL672167.2-201ENST00000377164 879 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC005042.1-201ENST00000393397 800 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 RPL22P22-201ENST00000395439 379 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RPL26P37-201ENST00000411983 438 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL139158.1-201ENST00000424719 340 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC009784.1-201ENST00000426484 460 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL136231.1-201ENST00000429407 730 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 GAPDHP59-201ENST00000435908 267 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 CLNS1AP1-201ENST00000435954 682 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 RPL7P55-201ENST00000450522 746 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 CFL1P4-201ENST00000451536 498 ntBASIC5.11□□□□□ -1.59
SHFQ7M4L6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.11□□□□□ -1.59
SHFQ7M4L6 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms