Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 SNORA30B-201ENST00000365319 129 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AL450124.1-201ENST00000376401 353 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC074085.1-201ENST00000413598 418 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC105402.2-201ENST00000438503 358 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 CYP2C56P-201ENST00000440076 291 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC011742.2-201ENST00000443818 352 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 RPL36AP55-201ENST00000454114 305 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC023194.2-201ENST00000465398 406 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 RPSAP48-201ENST00000466509 889 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC107398.1-201ENST00000486904 505 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 FAM206BP-201ENST00000510179 541 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AP006587.5-201ENST00000532033 739 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 OR4N1P-201ENST00000554847 949 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC092868.1-201ENST00000557949 802 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC022239.4-201ENST00000602626 504 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 THAP12P6-201ENST00000431978 2310 ntBASIC8.43□□□□□ -1.06
VARS2Q5ST30 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VARS2Q5ST30 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC010132.2-201ENST00000295493 1043 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 GAPDHP24-201ENST00000328713 983 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 RNA5SP442-201ENST00000365050 107 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 SNORA10-201ENST00000384084 133 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 MIR142-201ENST00000384835 87 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 MRPL42P2-201ENST00000403169 426 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AL078604.1-201ENST00000404609 466 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC127526.1-201ENST00000417526 366 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 HMGB3P10-201ENST00000434734 572 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC027124.1-201ENST00000440852 466 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AL353898.1-201ENST00000444055 238 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AL161722.1-201ENST00000446972 1032 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 Vault.3-201ENST00000516676 95 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 RNA5SP101-201ENST00000517036 108 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 IGHV7-40-201ENST00000520963 296 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 RAB30-209ENST00000532548 644 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 NUTF2P2-201ENST00000551207 384 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 RN7SL697P-201ENST00000582484 299 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms