Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN1BQ07699 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN1BQ07699 AC092079.1-201ENST00000558620 1985 ntBASIC5.04□□□□□ -1.6
SCN1BQ07699 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN1BQ07699 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN1BQ07699 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN1BQ07699 RBMY1HP-201ENST00000382759 1389 ntBASIC5.04□□□□□ -1.6
SCN1BQ07699 MTND4P21-201ENST00000453886 1357 ntBASIC5.04□□□□□ -1.6
SCN1BQ07699 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 RNA5SP241-201ENST00000391326 114 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 AL356057.1-202ENST00000402263 756 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 RNA5SP296-201ENST00000410523 111 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AL590609.2-201ENST00000421430 368 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC130360.1-201ENST00000425489 1117 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 NDUFB4P8-201ENST00000435351 367 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 HMGB1P26-201ENST00000452520 628 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC104164.1-201ENST00000460282 590 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC005165.2-201ENST00000466070 380 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 RPL21P6-201ENST00000479171 504 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC093663.2-201ENST00000484625 313 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC008629.2-201ENST00000503783 483 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AL671862.1-201ENST00000515851 349 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC130365.2-201ENST00000525882 1201 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC004923.2-201ENST00000529649 369 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AL078601.3-201ENST00000573303 535 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 MIR6721-201ENST00000617181 87 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AP004607.9-201ENST00000618202 316 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 AC091932.2-201ENST00000623014 291 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC093591.2-201ENST00000565254 3843 ntBASIC5.03□□□□□ -1.6
SCN1BQ07699 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN1BQ07699 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN1BQ07699 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN1BQ07699 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN1BQ07699 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 RNA5SP110-201ENST00000362638 115 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 RNU6-304P-201ENST00000364855 107 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN1BQ07699 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN1BQ07699 YWHAZP6-201ENST00000399764 738 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC211486.3-201ENST00000412694 621 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC099677.3-201ENST00000427081 395 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 ELOCP10-201ENST00000440624 327 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC007383.1-201ENST00000445875 636 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms