Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 OR4A6P-201ENST00000534364 970 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.07□□□□□ -1.92
HSPG2P98160 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 MON2-214ENST00000641654 10382 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 AC007114.2-201ENST00000576014 4281 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 RNF10P1-201ENST00000418589 369 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 FABP7P1-201ENST00000424004 391 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC3.07□□□□□ -1.92
HSPG2P98160 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.07□□□□□ -1.92
HSPG2P98160 NOP56P2-201ENST00000447491 769 ntBASIC3.07□□□□□ -1.92
HSPG2P98160 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.07□□□□□ -1.92
HSPG2P98160 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.07□□□□□ -1.92
HSPG2P98160 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.07□□□□□ -1.92
HSPG2P98160 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.07□□□□□ -1.92
HSPG2P98160 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HSPG2P98160 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HSPG2P98160 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 AC105342.1-201ENST00000378334 6848 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 HSFY6P-201ENST00000445573 403 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AL500522.2-201ENST00000448562 343 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.06□□□□□ -1.92
HSPG2P98160 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 RNU2-30P-201ENST00000516209 141 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AC019322.1-201ENST00000571869 389 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC3.06□□□□□ -1.92
HSPG2P98160 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HSPG2P98160 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 PPIAP9-201ENST00000403866 498 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 RPL23AP26-201ENST00000412728 464 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 RPS26P38-201ENST00000414476 348 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 AL139095.3-201ENST00000419672 1203 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.06□□□□□ -1.92
HSPG2P98160 RPS3AP54-201ENST00000435535 734 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AC092754.1-201ENST00000472975 479 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.06□□□□□ -1.92
HSPG2P98160 AC244100.1-202ENST00000621554 382 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.06□□□□□ -1.92
HSPG2P98160 TXNP2-201ENST00000443918 295 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 HCG14-201ENST00000444986 413 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 AL691482.1-201ENST00000453255 87 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 MEMO1P4-201ENST00000453590 386 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.06□□□□□ -1.92
HSPG2P98160 MIR6853-201ENST00000619642 74 ntBASIC3.06□□□□□ -1.92
HSPG2P98160 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HSPG2P98160 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
HSPG2P98160 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
HSPG2P98160 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms