Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC007956.1-201ENST00000555623 542 ntBASIC4□□□□□ -1.77
CCL20P78556 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 MRPS21P7-201ENST00000566937 238 ntBASIC4□□□□□ -1.77
CCL20P78556 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCL20P78556 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4□□□□□ -1.77
CCL20P78556 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4□□□□□ -1.77
CCL20P78556 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4□□□□□ -1.77
CCL20P78556 MIR6885-201ENST00000612241 66 ntBASIC4□□□□□ -1.77
CCL20P78556 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 AC005086.4-201ENST00000623065 213 ntBASIC4□□□□□ -1.77
CCL20P78556 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CCL20P78556 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4□□□□□ -1.77
CCL20P78556 AC104118.1-201ENST00000607625 1589 ntBASIC4□□□□□ -1.77
CCL20P78556 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4□□□□□ -1.77
CCL20P78556 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL20P78556 AC000123.3-201ENST00000624029 4975 ntBASIC4□□□□□ -1.77
CCL20P78556 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL20P78556 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.99□□□□□ -1.77
CCL20P78556 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 SOCS5P3-201ENST00000425115 1576 ntBASIC3.99□□□□□ -1.77
CCL20P78556 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 Y_RNA.209-201ENST00000364156 111 ntBASIC3.99□□□□□ -1.77
CCL20P78556 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CCL20P78556 AC002524.1-201ENST00000411687 547 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL20P78556 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL20P78556 QRSL1P2-201ENST00000418582 964 ntBASIC3.99□□□□□ -1.77
CCL20P78556 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC3.99□□□□□ -1.77
CCL20P78556 NPM1P22-201ENST00000427761 952 ntBASIC3.99□□□□□ -1.77
CCL20P78556 NMNAT1P2-201ENST00000435192 860 ntBASIC3.99□□□□□ -1.77
CCL20P78556 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.99□□□□□ -1.77
CCL20P78556 GAPDHP59-201ENST00000435908 267 ntBASIC3.99□□□□□ -1.77
CCL20P78556 LINC00328-2P-201ENST00000436585 219 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AC104634.1-201ENST00000452720 462 ntBASIC3.99□□□□□ -1.77
CCL20P78556 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL20P78556 AC091180.1-201ENST00000462104 372 ntBASIC3.99□□□□□ -1.77
CCL20P78556 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 RN7SL362P-201ENST00000494228 267 ntBASIC3.99□□□□□ -1.77
CCL20P78556 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL20P78556 NENFP3-201ENST00000503735 313 ntBASIC3.99□□□□□ -1.77
CCL20P78556 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL20P78556 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 NDUFB4P11-201ENST00000560510 395 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AC005341.1-201ENST00000571086 708 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL20P78556 U91328.4-201ENST00000608919 517 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AC092266.1-201ENST00000610958 165 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AL118522.2-201ENST00000616045 615 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AL121890.2-201ENST00000617644 465 ntBASIC3.99□□□□□ -1.77
CCL20P78556 MIR6732-201ENST00000619365 60 ntBASIC3.99□□□□□ -1.77
CCL20P78556 AC008691.1-209ENST00000642094 814 ntBASIC3.99□□□□□ -1.77
CCL20P78556 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCL20P78556 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL20P78556 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 MIPEPP2-201ENST00000422560 1819 ntBASIC3.98□□□□□ -1.77
CCL20P78556 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CCL20P78556 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL20P78556 GCNT1P4-201ENST00000404096 329 ntBASIC3.98□□□□□ -1.77
CCL20P78556 RNA5SP146-201ENST00000410743 123 ntBASIC3.98□□□□□ -1.77
CCL20P78556 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.98□□□□□ -1.77
CCL20P78556 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL20P78556 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL20P78556 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL20P78556 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL20P78556 RPL5P16-201ENST00000471467 790 ntBASIC3.98□□□□□ -1.77
CCL20P78556 RPL23AP37-201ENST00000479658 549 ntBASIC3.98□□□□□ -1.77
CCL20P78556 RN7SL817P-201ENST00000480777 288 ntBASIC3.98□□□□□ -1.77
CCL20P78556 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
CCL20P78556 AC097173.1-201ENST00000505862 819 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms