Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC008507.3-201ENST00000585753 472 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC124916.2-201ENST00000604416 224 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC018618.2-201ENST00000604770 446 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 RPSAP75-201ENST00000605848 301 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 AL133481.2-203ENST00000607558 139 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC023813.4-201ENST00000607580 580 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 AL355974.3-201ENST00000617383 467 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.58□□□□□ -1.52
NR1H2P55055 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC104966.1-201ENST00000467010 1464 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 AL354854.1-201ENST00000455940 1363 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC002524.1-201ENST00000411687 547 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AC092570.3-201ENST00000420113 693 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 FO393419.3-201ENST00000428741 282 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 RPSAP65-201ENST00000429660 595 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 MTCO1P52-201ENST00000433928 531 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 RPL23AP60-201ENST00000450011 454 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 NPM1P19-201ENST00000450070 712 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 RANP2-201ENST00000456833 229 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 RN7SL205P-201ENST00000490174 284 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AC104109.1-201ENST00000498563 436 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC095052.1-201ENST00000509955 863 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 ZNF519P4-201ENST00000514008 125 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC078899.1-201ENST00000521432 1185 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 BUD31P1-201ENST00000521828 359 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 AC007448.1-201ENST00000582714 234 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 AL391834.1-201ENST00000609609 560 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AL162574.1-201ENST00000615702 950 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.57□□□□□ -1.52
NR1H2P55055 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 MIR7159-201ENST00000620587 66 ntBASIC5.57□□□□□ -1.52
NR1H2P55055 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.57□□□□□ -1.52
NR1H2P55055 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NR1H2P55055 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NR1H2P55055 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 DDX18P4-201ENST00000511690 1966 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
NR1H2P55055 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.56□□□□□ -1.52
NR1H2P55055 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 AL136520.1-201ENST00000600311 1322 ntBASIC5.56□□□□□ -1.52
NR1H2P55055 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NR1H2P55055 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms