Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 SNORA27.3-201ENST00000364937 134 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 RNU6-1176P-201ENST00000390955 107 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AL009179.1-201ENST00000406085 265 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 METTL15P3-201ENST00000415522 1221 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC242426.1-201ENST00000435270 960 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC074367.1-201ENST00000438685 1125 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 NANOGP9-201ENST00000439890 892 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AL390119.1-201ENST00000440329 312 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC019185.1-201ENST00000442718 389 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 MTND5P8-201ENST00000449817 1083 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 SNORD125-201ENST00000459538 96 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC108693.1-201ENST00000496068 432 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCNKAP51800 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 IGKV2-18-201ENST00000522607 343 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 PMS2P3-207ENST00000529061 717 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AP003049.1-201ENST00000529418 457 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC137627.1-201ENST00000545761 289 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC027281.1-201ENST00000574178 758 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC012616.1-201ENST00000600294 197 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC084036.1-201ENST00000609190 508 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AP000894.4-201ENST00000610185 483 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AL158062.1-201ENST00000619632 745 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC132068.1-201ENST00000623805 459 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCNKAP51800 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCNKAP51800 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 AP001002.1-201ENST00000625148 1513 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCNKAP51800 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 RNU4-39P-201ENST00000362455 127 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 RNA5SP326-201ENST00000363209 110 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 RN7SKP28-201ENST00000364770 305 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 RN7SKP6-201ENST00000364795 319 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AL353625.1-202ENST00000366273 571 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC005042.1-201ENST00000393397 800 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 CCNB2P1-201ENST00000399411 1150 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 RN7SKP229-201ENST00000410465 302 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 MTND2P9-201ENST00000422293 931 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 OR6D1P-201ENST00000436165 939 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC012075.1-201ENST00000436549 580 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCNKAP51800 VN1R48P-201ENST00000448149 1036 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC018638.3-201ENST00000461273 132 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC093719.1-201ENST00000480427 441 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 ST13P12-201ENST00000508958 1094 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCNKAP51800 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCNKAP51800 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLCNKAP51800 CR383656.14-201ENST00000551951 406 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC105148.1-201ENST00000604961 409 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC010266.2-201ENST00000564741 3255 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 AL360270.2-201ENST00000562952 5985 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 MAPK10-338ENST00000641647 3362 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCNKAP51800 AC068870.1-201ENST00000563737 2455 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLCNKAP51800 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.47□□□□□ -1.53
CLCNKAP51800 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
CLCNKAP51800 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms