Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 SNORA17.1-201ENST00000362945 126 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 DBIP1-201ENST00000401435 260 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC008072.1-201ENST00000434254 824 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC093815.1-201ENST00000508637 280 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC007346.2-201ENST00000564816 892 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 AL353662.3-201ENST00000625131 237 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC1P51610 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 AC092747.4-201ENST00000620519 1861 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HCFC1P51610 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HCFC1P51610 AC005005.4-201ENST00000623789 16698 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 MAPK10-338ENST00000641647 3362 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.69□□□□□ -1.66
HCFC1P51610 RN7SKP145-201ENST00000363291 303 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 SETP9-201ENST00000423837 832 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 SETP10-201ENST00000424368 814 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 ELOCP3-201ENST00000439303 348 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 XKRYP6-201ENST00000440468 1116 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 XKRYP3-201ENST00000442113 1116 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 AC092647.3-201ENST00000443044 633 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.69□□□□□ -1.66
HCFC1P51610 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 AP002371.1-201ENST00000463604 433 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 SCARNA16.4-201ENST00000516956 187 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 AP002981.1-201ENST00000517692 975 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 AC134349.2-201ENST00000535136 910 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.69□□□□□ -1.66
HCFC1P51610 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HCFC1P51610 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 MIR3934-201ENST00000579806 107 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 AC023389.2-201ENST00000580031 955 ntBASIC4.69□□□□□ -1.66
HCFC1P51610 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC1P51610 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.69□□□□□ -1.66
HCFC1P51610 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HCFC1P51610 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC1P51610 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
HCFC1P51610 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HCFC1P51610 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCFC1P51610 RNA5SP487-201ENST00000410186 122 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 RAB28P1-201ENST00000411517 641 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.68□□□□□ -1.66
HCFC1P51610 AL772161.1-201ENST00000439130 476 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 AC021106.1-201ENST00000509020 1058 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 AC078899.1-201ENST00000521432 1185 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.68□□□□□ -1.66
HCFC1P51610 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.68□□□□□ -1.66
HCFC1P51610 AC079075.1-201ENST00000559543 878 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC1P51610 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.68□□□□□ -1.66
HCFC1P51610 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.68□□□□□ -1.66
HCFC1P51610 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 HIRAP1-201ENST00000605318 787 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 AC091948.2-201ENST00000636510 279 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 AC000095.2-202ENST00000637415 154 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 AC018809.2-201ENST00000602436 3823 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
HCFC1P51610 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.68□□□□□ -1.66
HCFC1P51610 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC1P51610 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 AC068870.1-201ENST00000563737 2455 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 IRF5P1-201ENST00000504852 2164 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HCFC1P51610 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HCFC1P51610 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC1P51610 U3.10-201ENST00000364459 214 ntBASIC4.68□□□□□ -1.66
HCFC1P51610 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCFC1P51610 RN7SKP17-201ENST00000411242 351 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms