Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU1-136P-201ENST00000384181 164 ntBASIC4.97□□□□□ -1.61
RFC3P40938 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFC3P40938 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFC3P40938 RNA5SP339-201ENST00000390987 122 ntBASIC4.97□□□□□ -1.61
RFC3P40938 RNGTTP1-201ENST00000420965 728 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AC007161.1-204ENST00000423039 460 ntBASIC4.97□□□□□ -1.61
RFC3P40938 SRSF1P1-201ENST00000424058 520 ntBASIC4.97□□□□□ -1.61
RFC3P40938 NPM1P22-201ENST00000427761 952 ntBASIC4.97□□□□□ -1.61
RFC3P40938 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.97□□□□□ -1.61
RFC3P40938 AL035090.1-201ENST00000454835 332 ntBASIC4.97□□□□□ -1.61
RFC3P40938 RN7SL222P-201ENST00000476452 299 ntBASIC4.97□□□□□ -1.61
RFC3P40938 RN7SL447P-201ENST00000494711 245 ntBASIC4.97□□□□□ -1.61
RFC3P40938 RPL15P21-201ENST00000495592 567 ntBASIC4.97□□□□□ -1.61
RFC3P40938 MTND6P2-201ENST00000512226 524 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 RNU6-941P-201ENST00000516346 108 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.97□□□□□ -1.61
RFC3P40938 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.97□□□□□ -1.61
RFC3P40938 OR8A2P-201ENST00000528631 952 ntBASIC4.97□□□□□ -1.61
RFC3P40938 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.97□□□□□ -1.61
RFC3P40938 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.97□□□□□ -1.61
RFC3P40938 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.97□□□□□ -1.61
RFC3P40938 HAUS8P1-201ENST00000549005 542 ntBASIC4.97□□□□□ -1.61
RFC3P40938 MIR3691-201ENST00000578066 90 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 NANOGP3-201ENST00000605855 286 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AL353729.2-201ENST00000605859 1249 ntBASIC4.97□□□□□ -1.61
RFC3P40938 AL445222.1-201ENST00000607259 628 ntBASIC4.97□□□□□ -1.61
RFC3P40938 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.97□□□□□ -1.61
RFC3P40938 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.97□□□□□ -1.61
RFC3P40938 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 CYP4F35P-202ENST00000636121 390 ntBASIC4.97□□□□□ -1.61
RFC3P40938 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 AC093591.2-201ENST00000565254 3843 ntBASIC4.97□□□□□ -1.61
RFC3P40938 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFC3P40938 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.96□□□□□ -1.61
RFC3P40938 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFC3P40938 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RFC3P40938 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFC3P40938 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFC3P40938 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
RFC3P40938 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RFC3P40938 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.96□□□□□ -1.62
RFC3P40938 RN7SKP273-201ENST00000411392 314 ntBASIC4.96□□□□□ -1.62
RFC3P40938 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 SETP15-201ENST00000412724 337 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.96□□□□□ -1.62
RFC3P40938 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 DSTNP5-201ENST00000427921 523 ntBASIC4.96□□□□□ -1.62
RFC3P40938 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.96□□□□□ -1.62
RFC3P40938 FTLP19-201ENST00000433300 394 ntBASIC4.96□□□□□ -1.62
RFC3P40938 OR52B5P-201ENST00000435337 951 ntBASIC4.96□□□□□ -1.62
RFC3P40938 RN7SL610P-201ENST00000463845 291 ntBASIC4.96□□□□□ -1.62
RFC3P40938 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 AC008410.1-201ENST00000483777 339 ntBASIC4.96□□□□□ -1.62
RFC3P40938 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
RFC3P40938 COX6B1P2-201ENST00000489624 230 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AC093763.2-201ENST00000505334 1223 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.96□□□□□ -1.62
RFC3P40938 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.96□□□□□ -1.62
RFC3P40938 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 HMGB1P40-201ENST00000525121 540 ntBASIC4.96□□□□□ -1.62
RFC3P40938 OR5AM1P-201ENST00000532136 1032 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AP004607.2-201ENST00000533949 322 ntBASIC4.96□□□□□ -1.62
RFC3P40938 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RFC3P40938 RPL10P14-201ENST00000565265 298 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.96□□□□□ -1.62
RFC3P40938 DPRXP4-201ENST00000578053 568 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.96□□□□□ -1.62
RFC3P40938 AP000769.2-201ENST00000602344 396 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AC126915.2-201ENST00000610957 190 ntBASIC4.96□□□□□ -1.62
RFC3P40938 RPSAP73-201ENST00000614820 330 ntBASIC4.96□□□□□ -1.62
RFC3P40938 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.96□□□□□ -1.62
RFC3P40938 AC109583.2-201ENST00000617367 129 ntBASIC4.96□□□□□ -1.62
RFC3P40938 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 OR52B5P-202ENST00000641118 1110 ntBASIC4.96□□□□□ -1.62
RFC3P40938 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RFC3P40938 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFC3P40938 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
RFC3P40938 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFC3P40938 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms