Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC011853.1-201ENST00000518911 454 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 AC022826.1-201ENST00000519383 805 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.75□□□□□ -1.49
CTNNA1P35221 OR4V1P-201ENST00000525394 1140 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA1P35221 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.75□□□□□ -1.49
CTNNA1P35221 AC092121.1-201ENST00000569452 202 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.75□□□□□ -1.49
CTNNA1P35221 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 MTCO2P22-201ENST00000603246 681 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 AC096553.1-201ENST00000605169 829 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 MIR6889-201ENST00000613185 59 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.75□□□□□ -1.49
CTNNA1P35221 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA1P35221 NEPNP-201ENST00000404786 1371 ntBASIC5.75□□□□□ -1.49
CTNNA1P35221 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CTNNA1P35221 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA1P35221 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CTNNA1P35221 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CTNNA1P35221 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CTNNA1P35221 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 SRRM1P3-201ENST00000426911 2678 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 MIR375-201ENST00000362103 64 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 RN7SKP275-201ENST00000364626 301 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 RMRPP5-201ENST00000411156 267 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AC245060.4-201ENST00000413293 1121 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AL691447.1-201ENST00000419456 387 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 HSPD1P12-201ENST00000429127 1069 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AC110602.1-201ENST00000437414 318 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AC016772.1-201ENST00000444170 1261 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 ENPP7P11-201ENST00000505915 627 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 snoU109.6-201ENST00000516831 118 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.74□□□□□ -1.49
CTNNA1P35221 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 AL365181.4-201ENST00000609800 547 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 AC091932.2-201ENST00000623014 291 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CTNNA1P35221 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CTNNA1P35221 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CTNNA1P35221 MTCO1P8-201ENST00000416914 1523 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
CTNNA1P35221 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CTNNA1P35221 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CTNNA1P35221 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CTNNA1P35221 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CTNNA1P35221 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CTNNA1P35221 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CTNNA1P35221 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.73□□□□□ -1.49
CTNNA1P35221 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 RNA5SP394-201ENST00000364216 119 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA1P35221 MIR7-1-201ENST00000384871 110 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 HMGB1P20-201ENST00000402555 677 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 AL034374.1-201ENST00000406329 351 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 AC017019.1-201ENST00000426129 261 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA1P35221 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTNNA1P35221 OR6D1P-201ENST00000436165 939 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 CYCSP11-201ENST00000436426 315 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 CACYBPP1-201ENST00000438592 684 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 CASP3P1-201ENST00000446037 609 ntBASIC5.73□□□□□ -1.49
CTNNA1P35221 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.73□□□□□ -1.49
CTNNA1P35221 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.73□□□□□ -1.49
CTNNA1P35221 AP006222.1-205ENST00000450734 457 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms