Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 ADAM5-202ENST00000399789 1942 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 RN7SKP28-201ENST00000364770 305 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 RPL12P9-201ENST00000412942 488 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 OR6E1P-201ENST00000414424 923 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 RANP7-201ENST00000418085 644 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC017019.1-201ENST00000426129 261 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 NPM1P22-201ENST00000427761 952 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 OR52E3P-201ENST00000452083 936 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 MTND6P2-201ENST00000512226 524 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 PRPF19P1-201ENST00000584766 898 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC012616.1-201ENST00000600294 197 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC022467.1-201ENST00000614738 749 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 CU639417.4-201ENST00000623928 207 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC104623.2-202ENST00000623477 4002 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 MUC2-202ENST00000613187 4845 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 AC093591.2-201ENST00000565254 3843 ntBASIC4.07□□□□□ -1.76
HLA-DMBP28068 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DMBP28068 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 RARSP1-201ENST00000542842 1418 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC011755.1-201ENST00000623763 2049 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 NPM1P40-201ENST00000412758 733 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 GTF3AP1-201ENST00000416942 1004 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 MARK2P12-201ENST00000420129 585 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC108161.1-201ENST00000461060 402 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC135999.1-201ENST00000478962 479 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 RPL15P21-201ENST00000495592 567 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 ATP5LP3-201ENST00000514223 304 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 LDHBP3-201ENST00000514909 822 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 RFPL4AP5-201ENST00000514977 504 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 RN7SKP99-201ENST00000517028 307 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 OR10D4P-201ENST00000525892 951 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 AC009027.1-201ENST00000604510 479 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 AP000864.1-201ENST00000609424 650 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.06□□□□□ -1.76
HLA-DMBP28068 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DMBP28068 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DMBP28068 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms