Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AP006245.2-201ENST00000522004 300 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC027369.5-201ENST00000533838 755 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.7□□□□□ -1.66
FREM3P0C091 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 AL133406.3-201ENST00000606817 541 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.7□□□□□ -1.66
FREM3P0C091 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FREM3P0C091 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FREM3P0C091 OR1L6-202ENST00000373684 1044 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FREM3P0C091 SNORA48.4-201ENST00000391089 134 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 RN7SKP16-201ENST00000410180 299 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC114755.2-201ENST00000413520 361 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC006455.6-201ENST00000426192 893 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 MYO5BP2-201ENST00000449815 1277 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 Z92846.1-201ENST00000456203 268 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC004453.1-201ENST00000487895 408 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 RPS12P31-201ENST00000491419 398 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.7□□□□□ -1.66
FREM3P0C091 AC006427.1-201ENST00000514359 712 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.7□□□□□ -1.66
FREM3P0C091 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.7□□□□□ -1.66
FREM3P0C091 AC079064.1-201ENST00000528365 362 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 RN7SL290P-201ENST00000578661 300 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.7□□□□□ -1.66
FREM3P0C091 AC100827.5-201ENST00000615883 426 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 AC087385.3-201ENST00000620477 187 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 MIR7703-201ENST00000620784 77 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 SAMMSON-210ENST00000641260 1308 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 NLRP3P1-201ENST00000622303 1785 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 MIR585-201ENST00000384887 94 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 RPS29P10-201ENST00000439197 166 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC090114.3-201ENST00000479267 829 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 COX6B1P5-201ENST00000509843 249 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.69□□□□□ -1.66
FREM3P0C091 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC091953.3-201ENST00000623220 236 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC099654.6-201ENST00000636487 512 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.69□□□□□ -1.66
FREM3P0C091 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 AL137141.1-201ENST00000624622 4836 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FREM3P0C091 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC007618.1-201ENST00000366455 732 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 RN7SKP126-201ENST00000411143 300 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 AC093655.2-201ENST00000425735 631 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 OR52E3P-201ENST00000452083 936 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 RPS3AP41-201ENST00000462701 778 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.69□□□□□ -1.66
FREM3P0C091 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.69□□□□□ -1.66
FREM3P0C091 AC098935.2-201ENST00000604222 466 ntBASIC4.69□□□□□ -1.66
FREM3P0C091 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
FREM3P0C091 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
FREM3P0C091 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
FREM3P0C091 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.68□□□□□ -1.66
FREM3P0C091 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FREM3P0C091 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms