Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM1P09493 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM1P09493 RNU1-65P-201ENST00000363919 148 ntBASIC5.78□□□□□ -1.48
TPM1P09493 RN7SKP28-201ENST00000364770 305 ntBASIC5.78□□□□□ -1.48
TPM1P09493 MIR589-201ENST00000385238 99 ntBASIC5.78□□□□□ -1.48
TPM1P09493 RNU2-18P-201ENST00000411224 162 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 OR5M12P-201ENST00000423388 929 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM1P09493 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM1P09493 AL161722.2-201ENST00000434731 981 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM1P09493 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM1P09493 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 RN7SL423P-201ENST00000486202 304 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.78□□□□□ -1.48
TPM1P09493 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.78□□□□□ -1.48
TPM1P09493 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 RFPL4AP5-201ENST00000514977 504 ntBASIC5.78□□□□□ -1.48
TPM1P09493 SNORA43.3-201ENST00000517240 103 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AC060775.1-201ENST00000518241 520 ntBASIC5.78□□□□□ -1.48
TPM1P09493 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.78□□□□□ -1.48
TPM1P09493 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM1P09493 RN7SL708P-201ENST00000580952 299 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM1P09493 AC011626.1-201ENST00000604710 562 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AC092111.2-201ENST00000611627 1414 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AL118522.2-201ENST00000616045 615 ntBASIC5.78□□□□□ -1.48
TPM1P09493 AC015914.2-201ENST00000618167 288 ntBASIC5.78□□□□□ -1.48
TPM1P09493 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM1P09493 AC073592.6-201ENST00000624271 415 ntBASIC5.78□□□□□ -1.48
TPM1P09493 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM1P09493 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM1P09493 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM1P09493 AC063976.2-201ENST00000425667 3556 ntBASIC5.78□□□□□ -1.48
TPM1P09493 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM1P09493 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
TPM1P09493 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.77□□□□□ -1.49
TPM1P09493 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TPM1P09493 MTCO1P46-201ENST00000451639 1491 ntBASIC5.77□□□□□ -1.49
TPM1P09493 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM1P09493 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM1P09493 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TPM1P09493 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM1P09493 AC106872.5-201ENST00000508856 1416 ntBASIC5.77□□□□□ -1.49
TPM1P09493 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TPM1P09493 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TPM1P09493 AC007068.1-201ENST00000396690 844 ntBASIC5.77□□□□□ -1.49
TPM1P09493 RN7SKP125-201ENST00000410481 302 ntBASIC5.77□□□□□ -1.49
TPM1P09493 Z93019.1-201ENST00000416450 973 ntBASIC5.77□□□□□ -1.49
TPM1P09493 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.77□□□□□ -1.49
TPM1P09493 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.77□□□□□ -1.49
TPM1P09493 BTG4P1-201ENST00000510421 183 ntBASIC5.77□□□□□ -1.49
TPM1P09493 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
TPM1P09493 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 AC060766.1-201ENST00000590824 627 ntBASIC5.77□□□□□ -1.49
TPM1P09493 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM1P09493 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM1P09493 AL683826.1-201ENST00000624104 627 ntBASIC5.77□□□□□ -1.49
TPM1P09493 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM1P09493 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TPM1P09493 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM1P09493 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM1P09493 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TPM1P09493 RBPJP2-201ENST00000618187 1444 ntBASIC5.76□□□□□ -1.49
TPM1P09493 AC006210.2-201ENST00000367074 1545 ntBASIC5.76□□□□□ -1.49
TPM1P09493 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TPM1P09493 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.76□□□□□ -1.49
TPM1P09493 AL034379.1-201ENST00000423216 253 ntBASIC5.76□□□□□ -1.49
TPM1P09493 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.76□□□□□ -1.49
TPM1P09493 ARAFP2-201ENST00000440565 559 ntBASIC5.76□□□□□ -1.49
TPM1P09493 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM1P09493 GAPDHP25-201ENST00000447061 1001 ntBASIC5.76□□□□□ -1.49
TPM1P09493 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 AC104849.1-201ENST00000462623 405 ntBASIC5.76□□□□□ -1.49
TPM1P09493 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.76□□□□□ -1.49
TPM1P09493 RPL7P40-201ENST00000481703 745 ntBASIC5.76□□□□□ -1.49
TPM1P09493 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM1P09493 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 NRBF2P4-201ENST00000520874 850 ntBASIC5.76□□□□□ -1.49
TPM1P09493 AP004607.2-201ENST00000533949 322 ntBASIC5.76□□□□□ -1.49
TPM1P09493 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM1P09493 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TPM1P09493 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM1P09493 TAS2R6P-201ENST00000605022 826 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms