Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MTND2P11-201ENST00000423638 648 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P09429 AC099677.3-201ENST00000427081 395 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGB1P09429 CYCSP12-201ENST00000437729 300 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGB1P09429 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC090602.1-201ENST00000469695 252 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC023050.1-201ENST00000498198 304 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.09□□□□□ -1.27
HMGB1P09429 TOMM22P4-201ENST00000511318 336 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGB1P09429 IGKV2-19-201ENST00000518132 283 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGB1P09429 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P09429 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGB1P09429 OR1E3-201ENST00000575608 948 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC006115.2-201ENST00000596823 202 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 AC005776.1-201ENST00000603164 290 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC093765.1-201ENST00000603758 881 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 AC006946.3-201ENST00000609791 756 ntBASIC7.09□□□□□ -1.27
HMGB1P09429 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P09429 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HMGB1P09429 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P09429 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P09429 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HMGB1P09429 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.09□□□□□ -1.28
HMGB1P09429 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HMGB1P09429 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGB1P09429 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGB1P09429 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGB1P09429 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HMGB1P09429 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 AL158050.1-201ENST00000416077 457 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC092570.3-201ENST00000420113 693 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 AC073410.1-201ENST00000435125 589 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 RPL23AP19-201ENST00000436229 369 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AL353662.1-201ENST00000439099 327 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC023245.1-201ENST00000468501 517 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC112518.2-201ENST00000508565 425 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC018797.1-201ENST00000510791 255 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 RN7SKP288-201ENST00000516227 268 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 snoU109.5-201ENST00000516231 132 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P09429 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P09429 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC084757.1-201ENST00000559987 490 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC104229.1-201ENST00000561364 255 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC007346.2-201ENST00000564816 892 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 MIR4512-201ENST00000583257 77 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC068768.2-201ENST00000602352 343 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 AL158211.2-201ENST00000607282 395 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P09429 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 AC245100.7-201ENST00000609678 442 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P09429 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 CASC19-204ENST00000641001 2055 ntBASIC7.08□□□□□ -1.28
HMGB1P09429 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC7.08□□□□□ -1.28
HMGB1P09429 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P09429 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P09429 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P09429 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HMGB1P09429 AC005224.3-201ENST00000584683 2140 ntBASIC7.07□□□□□ -1.28
HMGB1P09429 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms