Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
MT-ND1P03886 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
MT-ND1P03886 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.02□□□□□ -1.61
MT-ND1P03886 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MT-ND1P03886 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC079298.1-201ENST00000625026 1619 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MT-ND1P03886 SNORA16A-201ENST00000384342 137 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.01□□□□□ -1.61
MT-ND1P03886 RCC2P2-201ENST00000422174 918 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 SETP10-201ENST00000424368 814 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.01□□□□□ -1.61
MT-ND1P03886 FCF1P7-201ENST00000451185 558 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC108161.1-201ENST00000461060 402 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AC011476.1-201ENST00000466725 307 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.01□□□□□ -1.61
MT-ND1P03886 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 EIF4A2P5-201ENST00000529914 499 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.01□□□□□ -1.61
MT-ND1P03886 EIF1AXP2-201ENST00000555940 413 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AP001496.3-201ENST00000580230 913 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC009303.3-201ENST00000591103 736 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC067773.1-201ENST00000603284 1094 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 AC009027.1-201ENST00000604510 479 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 OR10AB1P-202ENST00000641219 1686 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
MT-ND1P03886 CASC19-248ENST00000641674 1356 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MT-ND1P03886 LINC01963-201ENST00000562038 3148 ntBASIC5.01□□□□□ -1.61
MT-ND1P03886 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.01□□□□□ -1.61
MT-ND1P03886 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 AL672167.1-204ENST00000641875 3017 ntBASIC5□□□□□ -1.61
MT-ND1P03886 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 AC106872.5-201ENST00000508856 1416 ntBASIC5□□□□□ -1.61
MT-ND1P03886 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 TTC39DP-201ENST00000416781 1688 ntBASIC5□□□□□ -1.61
MT-ND1P03886 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5□□□□□ -1.61
MT-ND1P03886 RNA5SP394-201ENST00000364216 119 ntBASIC5□□□□□ -1.61
MT-ND1P03886 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 MIR551A-201ENST00000385042 96 ntBASIC5□□□□□ -1.61
MT-ND1P03886 DBIP1-201ENST00000401435 260 ntBASIC5□□□□□ -1.61
MT-ND1P03886 HMGB1P20-201ENST00000402555 677 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC002524.1-201ENST00000411687 547 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 OR6D1P-201ENST00000436165 939 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AC005297.1-201ENST00000444765 862 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC012512.1-201ENST00000446594 718 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 VDAC2P4-201ENST00000452925 711 ntBASIC5□□□□□ -1.61
MT-ND1P03886 HLA-DPA3-207ENST00000454398 229 ntBASIC5□□□□□ -1.61
MT-ND1P03886 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5□□□□□ -1.61
MT-ND1P03886 RN7SL168P-201ENST00000463821 279 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC092754.1-201ENST00000472975 479 ntBASIC5□□□□□ -1.61
MT-ND1P03886 OR52A4P-203ENST00000498233 1014 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5□□□□□ -1.61
MT-ND1P03886 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 AC026616.1-201ENST00000523157 525 ntBASIC5□□□□□ -1.61
MT-ND1P03886 ARL6IP1P3-201ENST00000524544 560 ntBASIC5□□□□□ -1.61
MT-ND1P03886 OR8A2P-201ENST00000528631 952 ntBASIC5□□□□□ -1.61
MT-ND1P03886 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5□□□□□ -1.61
MT-ND1P03886 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5□□□□□ -1.61
MT-ND1P03886 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms