Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA1P02708 ST13P12-201ENST00000508958 1094 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.8□□□□□ -1.48
CHRNA1P02708 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 MIR3934-201ENST00000579806 107 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AC025857.2-201ENST00000602711 238 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA1P02708 AC091953.3-201ENST00000623220 236 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 AL353662.3-201ENST00000625131 237 ntBASIC5.8□□□□□ -1.48
CHRNA1P02708 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA1P02708 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CHRNA1P02708 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA1P02708 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA1P02708 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHRNA1P02708 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA1P02708 THAP12P4-201ENST00000528321 2266 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AL355488.2-201ENST00000609909 2850 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 NUDT19P3-201ENST00000404698 555 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 MRPS21P2-201ENST00000424704 264 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AC104837.2-201ENST00000427236 424 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 RPL5P2-201ENST00000429598 854 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 LINC02210-201ENST00000444561 288 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 RPL31P44-201ENST00000447680 377 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.79□□□□□ -1.48
CHRNA1P02708 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC091912.1-201ENST00000511351 248 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 SCARNA20.4-201ENST00000516969 131 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC136777.2-201ENST00000522979 358 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 AC015849.6-201ENST00000605454 474 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA1P02708 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA1P02708 INTS6P1-201ENST00000504674 2530 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 AC083899.1-201ENST00000454465 3819 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 SAMM50P1-201ENST00000455403 1399 ntBASIC5.79□□□□□ -1.48
CHRNA1P02708 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CHRNA1P02708 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC092451.3-201ENST00000625067 1343 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHRNA1P02708 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHRNA1P02708 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.78□□□□□ -1.48
CHRNA1P02708 SNORD56.6-201ENST00000384569 71 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHRNA1P02708 MIR1182-201ENST00000408363 97 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 GJA6P-201ENST00000415117 1042 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.78□□□□□ -1.48
CHRNA1P02708 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.78□□□□□ -1.48
CHRNA1P02708 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.78□□□□□ -1.48
CHRNA1P02708 TRY2P-201ENST00000448860 689 ntBASIC5.78□□□□□ -1.48
CHRNA1P02708 RPS3AP53-201ENST00000454716 778 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms