Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AC116351.2-201ENST00000606540 1585 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AC018553.1-201ENST00000616682 1458 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AL158047.1-201ENST00000445918 881 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 FAM197Y4-202ENST00000622692 608 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 RPPH1-201ENST00000516869 333 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CLCA3PQ9Y6N3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLCA3PQ9Y6N3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms