Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCA3PQ9Y6N3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AC116351.2-201ENST00000606540 1585 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AC018553.1-201ENST00000616682 1458 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 AL158047.1-201ENST00000445918 881 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 FAM197Y4-202ENST00000622692 608 ntBASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 RPPH1-201ENST00000516869 333 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCA3PQ9Y6N3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCA3PQ9Y6N3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CLCA3PQ9Y6N3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLCA3PQ9Y6N3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCA3PQ9Y6N3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms