Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 AC004911.1-201ENST00000416316 871 ntBASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 AC091799.1-201ENST00000422823 811 ntBASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 AP000997.3-201ENST00000623333 2250 ntBASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGB1Q9Y5G3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 AC092437.1-201ENST00000624794 1048 ntBASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB1Q9Y5G3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.89■□□□□ 0.46
PCDHGB1Q9Y5G3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDHGB1Q9Y5G3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 ID1-201ENST00000376105 1233 ntBASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 YBX1P1-201ENST00000445822 960 ntBASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 AC090164.3-201ENST00000610780 2143 ntBASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB1Q9Y5G3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 BICD1-207ENST00000551848 1962 ntBASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms