Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AC023632.3-201ENST00000521633 145 ntBASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AL589743.5-201ENST00000616611 1050 ntBASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 AC093503.3-201ENST00000624917 2352 ntBASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPS28Q9Y2Q9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRPS28Q9Y2Q9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.83■□□□□ 0.29
MRPS28Q9Y2Q9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MRPS28Q9Y2Q9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 C2orf69P4-201ENST00000565394 541 ntBASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 AC011767.1-201ENST00000617410 1153 ntBASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPS28Q9Y2Q9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.82■□□□□ 0.28
MRPS28Q9Y2Q9 AC087623.3-201ENST00000607047 1098 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms