Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 AL355075.4-201ENST00000554988 638 ntBASIC20.42■□□□□ 0.86
SCML2Q9UQR0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 AL031985.4-201ENST00000642138 673 ntBASIC20.42■□□□□ 0.86
SCML2Q9UQR0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCML2Q9UQR0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 AC004980.1-204ENST00000429707 299 ntBASIC20.41■□□□□ 0.86
SCML2Q9UQR0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 AC116562.2-201ENST00000507042 360 ntBASIC20.41■□□□□ 0.86
SCML2Q9UQR0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 AC026271.3-201ENST00000571884 352 ntBASIC20.41■□□□□ 0.86
SCML2Q9UQR0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCML2Q9UQR0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 TSPY15P-201ENST00000457163 923 ntBASIC20.4■□□□□ 0.86
SCML2Q9UQR0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 REXO1L10P-201ENST00000615707 1290 ntBASIC20.4■□□□□ 0.86
SCML2Q9UQR0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SCML2Q9UQR0 REXO1L12P-201ENST00000622156 912 ntBASIC20.4■□□□□ 0.86
SCML2Q9UQR0 AC131212.4-201ENST00000623606 975 ntBASIC20.4■□□□□ 0.86
SCML2Q9UQR0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.4■□□□□ 0.86
SCML2Q9UQR0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SCML2Q9UQR0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SCML2Q9UQR0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SCML2Q9UQR0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCML2Q9UQR0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.39■□□□□ 0.86
SCML2Q9UQR0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SCML2Q9UQR0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCML2Q9UQR0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCML2Q9UQR0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCML2Q9UQR0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCML2Q9UQR0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms