Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NPIPA1Q9UND3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 AL391422.3-201ENST00000603791 2761 ntBASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPIPA1Q9UND3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 AL355075.4-201ENST00000554988 638 ntBASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 AC133561.5-201ENST00000635547 218 ntBASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPIPA1Q9UND3 SLC25A24-204ENST00000569674 2357 ntBASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AF186192.3-201ENST00000583427 947 ntBASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AC026471.5-201ENST00000615068 467 ntBASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 AC099778.1-201ENST00000568593 1911 ntBASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPIPA1Q9UND3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AL353807.1-201ENST00000427475 662 ntBASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AL355355.2-201ENST00000442321 338 ntBASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AC004264.1-201ENST00000608354 794 ntBASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.05■□□□□ 0.48
NPIPA1Q9UND3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 AC087499.1-201ENST00000418141 1075 ntBASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.04■□□□□ 0.48
NPIPA1Q9UND3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms