Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 AC069236.1-201ENST00000604339 616 ntBASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SALL4Q9UJQ4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 AL161938.1-201ENST00000569833 2180 ntBASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 AC018553.1-201ENST00000616682 1458 ntBASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SALL4Q9UJQ4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 AL589743.5-201ENST00000616611 1050 ntBASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SALL4Q9UJQ4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 GUSBP6-202ENST00000438529 1198 ntBASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 AC133552.2-202ENST00000575694 574 ntBASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 OR10C1-204ENST00000622521 1039 ntBASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL4Q9UJQ4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 AL138781.2-201ENST00000617896 1843 ntBASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms