Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
RIMBP3Q9UFD9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.39■■■□□ 2.61
RIMBP3Q9UFD9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 AC098831.1-202ENST00000438821 336 ntBASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 RNPS1P1-201ENST00000507437 918 ntBASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 AC116351.2-201ENST00000606540 1585 ntBASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RIMBP3Q9UFD9 TFP1-202ENST00000475455 1573 ntBASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.37■■■□□ 2.61
RIMBP3Q9UFD9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 AL162741.1-201ENST00000565563 1558 ntBASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 AC112497.1-201ENST00000624824 639 ntBASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC31.36■■■□□ 2.61
RIMBP3Q9UFD9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 PGAM5P1-201ENST00000518923 814 ntBASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 MIR7706-201ENST00000613747 67 ntBASIC31.35■■■□□ 2.61
RIMBP3Q9UFD9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 REXO1L6P-202ENST00000619970 1078 ntBASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC31.34■■■□□ 2.61
RIMBP3Q9UFD9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC31.33■■■□□ 2.61
RIMBP3Q9UFD9 HNRNPA1P28-201ENST00000424481 961 ntBASIC31.33■■■□□ 2.61
RIMBP3Q9UFD9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC31.33■■■□□ 2.61
RIMBP3Q9UFD9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC31.33■■■□□ 2.61
RIMBP3Q9UFD9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 AL390719.2-201ENST00000606993 987 ntBASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
RIMBP3Q9UFD9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms