Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CXXC1Q9P0U4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 FP700111.2-201ENST00000619190 1892 ntBASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 ATP5G2P1-201ENST00000433580 426 ntBASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 GPALPP1-207ENST00000611650 899 ntBASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CXXC1Q9P0U4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 CA15P1-201ENST00000481698 905 ntBASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CXXC1Q9P0U4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CXXC1Q9P0U4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CXXC1Q9P0U4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CXXC1Q9P0U4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 PVRIG2P-201ENST00000435460 978 ntBASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 AP000347.1-202ENST00000435868 847 ntBASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 TMEM179-206ENST00000616017 1645 ntBASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
CXXC1Q9P0U4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CXXC1Q9P0U4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 FDX1P1-201ENST00000449115 551 ntBASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.05■□□□□ 0.96
CXXC1Q9P0U4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms