Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 AP006587.1-201ENST00000534129 1502 ntBASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 AL691432.2-201ENST00000607222 2038 ntBASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 AC009237.14-201ENST00000609975 1594 ntBASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PARPBPQ9NWS1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 AC239809.2-201ENST00000415381 517 ntBASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 AC004264.1-201ENST00000608354 794 ntBASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PARPBPQ9NWS1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 TMEM179-206ENST00000616017 1645 ntBASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 AC133681.1-201ENST00000465482 601 ntBASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 C1QBPP2-201ENST00000528754 825 ntBASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 AC233263.1-201ENST00000578059 224 ntBASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 AL023875.1-201ENST00000640777 796 ntBASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PARPBPQ9NWS1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PARPBPQ9NWS1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms