Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
CCM2LQ9NUG4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 AC010141.2-201ENST00000452426 721 ntBASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCM2LQ9NUG4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC069152.1-201ENST00000438030 544 ntBASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC008687.6-201ENST00000596318 630 ntBASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2LQ9NUG4 AC079598.2-202ENST00000546624 1451 ntBASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2LQ9NUG4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCM2LQ9NUG4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms