Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.64■□□□□ 0.89
GDF3Q9NR23 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.64■□□□□ 0.89
GDF3Q9NR23 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GDF3Q9NR23 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GDF3Q9NR23 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 ESRRAP1-201ENST00000400596 1257 ntBASIC20.63■□□□□ 0.89
GDF3Q9NR23 LSM12P1-201ENST00000411836 588 ntBASIC20.63■□□□□ 0.89
GDF3Q9NR23 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.63■□□□□ 0.89
GDF3Q9NR23 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.63■□□□□ 0.89
GDF3Q9NR23 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.63■□□□□ 0.89
GDF3Q9NR23 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GDF3Q9NR23 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GDF3Q9NR23 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 AC026471.1-201ENST00000564629 3026 ntBASIC20.62■□□□□ 0.89
GDF3Q9NR23 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.62■□□□□ 0.89
GDF3Q9NR23 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GDF3Q9NR23 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 LETM1P2-201ENST00000597330 2178 ntBASIC20.61■□□□□ 0.89
GDF3Q9NR23 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 AC007322.3-201ENST00000426526 701 ntBASIC20.61■□□□□ 0.89
GDF3Q9NR23 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 FAM21FP-204ENST00000608637 956 ntBASIC20.61■□□□□ 0.89
GDF3Q9NR23 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.61■□□□□ 0.89
GDF3Q9NR23 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GDF3Q9NR23 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GDF3Q9NR23 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GDF3Q9NR23 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.6■□□□□ 0.89
GDF3Q9NR23 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms