Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KRT18P56-201ENST00000507275 550 ntBASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 KRT126P-201ENST00000549467 1181 ntBASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 FAM87A-204ENST00000613235 858 ntBASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 AC116351.2-201ENST00000606540 1585 ntBASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDLIM7Q9NR12 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 AC026271.3-201ENST00000571884 352 ntBASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.98■■□□□ 1.11
PDLIM7Q9NR12 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 TFP1-202ENST00000475455 1573 ntBASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 AC117947.1-201ENST00000427448 529 ntBASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 DGCR10-201ENST00000609839 495 ntBASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.97■■□□□ 1.11
PDLIM7Q9NR12 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 INGX-201ENST00000359239 846 ntBASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM7Q9NR12 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 FAM8A6P-201ENST00000407496 1135 ntBASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 B3GAT3P1-201ENST00000471720 806 ntBASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 AC018553.1-201ENST00000616682 1458 ntBASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM7Q9NR12 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms