Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.76■□□□□ 0.43
HMG20AQ9NP66 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 AL358852.1-201ENST00000623174 1268 ntBASIC17.75■□□□□ 0.43
HMG20AQ9NP66 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMG20AQ9NP66 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 AC005837.3-201ENST00000612163 286 ntBASIC17.74■□□□□ 0.43
HMG20AQ9NP66 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HMG20AQ9NP66 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 AC068880.1-201ENST00000507289 2297 ntBASIC17.73■□□□□ 0.43
HMG20AQ9NP66 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms