Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VPS11Q9H270 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS11Q9H270 KRT18P5-201ENST00000436075 1291 ntBASIC19.68■□□□□ 0.74
VPS11Q9H270 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS11Q9H270 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.68■□□□□ 0.74
VPS11Q9H270 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS11Q9H270 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 AP001271.2-201ENST00000624018 1556 ntBASIC19.68■□□□□ 0.74
VPS11Q9H270 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS11Q9H270 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS11Q9H270 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VPS11Q9H270 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS11Q9H270 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VPS11Q9H270 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VPS11Q9H270 HLA-G-202ENST00000376815 851 ntBASIC19.67■□□□□ 0.74
VPS11Q9H270 HLA-G-203ENST00000376818 1127 ntBASIC19.67■□□□□ 0.74
VPS11Q9H270 AL355472.2-201ENST00000422958 438 ntBASIC19.67■□□□□ 0.74
VPS11Q9H270 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.67■□□□□ 0.74
VPS11Q9H270 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS11Q9H270 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS11Q9H270 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS11Q9H270 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.66■□□□□ 0.74
VPS11Q9H270 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
VPS11Q9H270 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
VPS11Q9H270 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 CYP2T3P-201ENST00000601990 817 ntBASIC19.66■□□□□ 0.74
VPS11Q9H270 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS11Q9H270 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VPS11Q9H270 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VPS11Q9H270 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS11Q9H270 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
VPS11Q9H270 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS11Q9H270 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS11Q9H270 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 AC069236.1-201ENST00000604339 616 ntBASIC19.65■□□□□ 0.74
VPS11Q9H270 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VPS11Q9H270 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS11Q9H270 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
VPS11Q9H270 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS11Q9H270 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS11Q9H270 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS11Q9H270 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.74
VPS11Q9H270 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS11Q9H270 CYP2T1P-201ENST00000432607 1285 ntBASIC19.64■□□□□ 0.73
VPS11Q9H270 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms