Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 MIR663A-201ENST00000385250 93 ntBASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 RAP2CP1-201ENST00000605103 478 ntBASIC20.83■□□□□ 0.93
PACSIN1Q9BY11 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PACSIN1Q9BY11 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PACSIN1Q9BY11 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PACSIN1Q9BY11 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.83■□□□□ 0.92
PACSIN1Q9BY11 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 AF201337.1-201ENST00000520239 748 ntBASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PACSIN1Q9BY11 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 CROCCP5-201ENST00000436658 830 ntBASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 AL049812.1-201ENST00000432563 2267 ntBASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PACSIN1Q9BY11 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 TFP1-202ENST00000475455 1573 ntBASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 AC124283.5-201ENST00000624661 1809 ntBASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.8■□□□□ 0.92
PACSIN1Q9BY11 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.79■□□□□ 0.92
PACSIN1Q9BY11 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms