Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP1Q9BWH6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 AC125437.2-201ENST00000625180 2167 ntBASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 KRT16P6-202ENST00000425692 1426 ntBASIC23.83■■□□□ 1.41
RPAP1Q9BWH6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.83■■□□□ 1.4
RPAP1Q9BWH6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.82■■□□□ 1.4
RPAP1Q9BWH6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 AC073195.1-201ENST00000607241 877 ntBASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP1Q9BWH6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 AL355355.2-201ENST00000442321 338 ntBASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP1Q9BWH6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 NUDT16P1-203ENST00000513809 620 ntBASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP1Q9BWH6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 FAM197Y1-201ENST00000421178 764 ntBASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 AC004264.1-201ENST00000608354 794 ntBASIC23.78■■□□□ 1.4
RPAP1Q9BWH6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms