Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF4Q9BUZ4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC125437.2-201ENST00000625180 2167 ntBASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 UBE2SP1-201ENST00000450587 669 ntBASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 RPS2P4-201ENST00000476944 856 ntBASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 C2orf69P4-201ENST00000565394 541 ntBASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 AL049812.1-201ENST00000432563 2267 ntBASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAF4Q9BUZ4 LTB4R2-202ENST00000528054 3092 ntBASIC17.46■□□□□ 0.38
TRAF4Q9BUZ4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAF4Q9BUZ4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 PGM5P4-201ENST00000421970 445 ntBASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAF4Q9BUZ4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 RPPH1-201ENST00000516869 333 ntBASIC17.44■□□□□ 0.38
TRAF4Q9BUZ4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms