Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 AC007663.1-201ENST00000438948 1240 ntBASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 YBX1P2-201ENST00000489612 999 ntBASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 AC139887.4-201ENST00000607877 719 ntBASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.14□□□□□ -0.15
TM2D3Q9BRN9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 TMEM179-206ENST00000616017 1645 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 TSPY5P-201ENST00000426936 936 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 TSPY17P-201ENST00000450329 467 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 COX11P1-201ENST00000489116 835 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 AL512604.3-201ENST00000569583 964 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 AC092338.2-201ENST00000568827 1415 ntBASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM2D3Q9BRN9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AL031133.1-201ENST00000406807 723 ntBASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AC092647.4-201ENST00000457211 535 ntBASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 Z85996.1-201ENST00000494644 937 ntBASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 AL023803.3-201ENST00000615559 522 ntBASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 EP400NL-214ENST00000641289 2402 ntBASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TM2D3Q9BRN9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 KRT8P8-201ENST00000434750 1448 ntBASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TM2D3Q9BRN9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms