Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL136116.3-201ENST00000402907 1138 ntBASIC16.85■□□□□ 0.29
CMTM3Q96MX0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMTM3Q96MX0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMTM3Q96MX0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMTM3Q96MX0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMTM3Q96MX0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMTM3Q96MX0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 HLA-G-202ENST00000376815 851 ntBASIC16.83■□□□□ 0.28
CMTM3Q96MX0 HLA-G-203ENST00000376818 1127 ntBASIC16.83■□□□□ 0.28
CMTM3Q96MX0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 AC104187.1-201ENST00000607510 612 ntBASIC16.83■□□□□ 0.28
CMTM3Q96MX0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 TEX21P-204ENST00000641479 1693 ntBASIC16.83■□□□□ 0.28
CMTM3Q96MX0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.28
CMTM3Q96MX0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CYP21A1P-202ENST00000354927 1481 ntBASIC16.82■□□□□ 0.28
CMTM3Q96MX0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.82■□□□□ 0.28
CMTM3Q96MX0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMTM3Q96MX0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms