Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3S1Q92572 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
AP3S1Q92572 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3S1Q92572 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
AP3S1Q92572 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3S1Q92572 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S1Q92572 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S1Q92572 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3S1Q92572 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3S1Q92572 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
AP3S1Q92572 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 AC006333.2-201ENST00000607957 2099 ntBASIC17.25■□□□□ 0.35
AP3S1Q92572 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3S1Q92572 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S1Q92572 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S1Q92572 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
AP3S1Q92572 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3S1Q92572 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3S1Q92572 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 NOC2LP2-201ENST00000407594 1944 ntBASIC17.24■□□□□ 0.35
AP3S1Q92572 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 AL161938.1-201ENST00000569833 2180 ntBASIC17.24■□□□□ 0.35
AP3S1Q92572 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.24■□□□□ 0.35
AP3S1Q92572 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.24■□□□□ 0.35
AP3S1Q92572 AC126544.1-201ENST00000580842 1059 ntBASIC17.24■□□□□ 0.35
AP3S1Q92572 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
AP3S1Q92572 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3S1Q92572 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S1Q92572 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S1Q92572 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AP3S1Q92572 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP3S1Q92572 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.23■□□□□ 0.35
AP3S1Q92572 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 AC009299.2-201ENST00000482477 511 ntBASIC17.23■□□□□ 0.35
AP3S1Q92572 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.23■□□□□ 0.35
AP3S1Q92572 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.23■□□□□ 0.35
AP3S1Q92572 AL512631.2-201ENST00000604634 923 ntBASIC17.23■□□□□ 0.35
AP3S1Q92572 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.23■□□□□ 0.35
AP3S1Q92572 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.23■□□□□ 0.35
AP3S1Q92572 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S1Q92572 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
AP3S1Q92572 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S1Q92572 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms