Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.89■□□□□ 0.77
CHD5Q8TDI0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHD5Q8TDI0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 MIR4497-201ENST00000583208 89 ntBASIC19.88■□□□□ 0.77
CHD5Q8TDI0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 TREX1-205ENST00000625293 1783 ntBASIC19.88■□□□□ 0.77
CHD5Q8TDI0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 HTR7P1-201ENST00000538670 1336 ntBASIC19.88■□□□□ 0.77
CHD5Q8TDI0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 Z99916.2-201ENST00000604037 246 ntBASIC19.88■□□□□ 0.77
CHD5Q8TDI0 AL445675.2-201ENST00000620291 557 ntBASIC19.88■□□□□ 0.77
CHD5Q8TDI0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD5Q8TDI0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD5Q8TDI0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 REXO1L12P-201ENST00000622156 912 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 HLA-A-209ENST00000638375 975 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AP006294.2-201ENST00000641667 209 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AC104417.2-201ENST00000562989 1793 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD5Q8TDI0 AL158211.5-201ENST00000623583 2518 ntBASIC19.86■□□□□ 0.77
CHD5Q8TDI0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 ZNF815P-204ENST00000434898 1737 ntBASIC19.85■□□□□ 0.77
CHD5Q8TDI0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 CD177P1-201ENST00000606252 935 ntBASIC19.85■□□□□ 0.77
CHD5Q8TDI0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD5Q8TDI0 MIR718-201ENST00000390190 70 ntBASIC19.84■□□□□ 0.77
CHD5Q8TDI0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.84■□□□□ 0.77
CHD5Q8TDI0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD5Q8TDI0 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms