Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ALMS1Q8TCU4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 DPP3P2-201ENST00000416030 1696 ntBASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 AC133561.1-201ENST00000568600 2415 ntBASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 AL022342.1-201ENST00000400363 863 ntBASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ALMS1Q8TCU4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 AC005229.4-201ENST00000610085 2198 ntBASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 KRT8P41-201ENST00000533985 1514 ntBASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ALMS1Q8TCU4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 LINC01465-201ENST00000408887 1940 ntBASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALMS1Q8TCU4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 RNA5SP419-201ENST00000515908 135 ntBASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALMS1Q8TCU4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms