Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 AP006294.2-201ENST00000641667 209 ntBASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01555Q8NAE3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 AC093827.2-201ENST00000512654 315 ntBASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 KRT8P8-201ENST00000434750 1448 ntBASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.88■□□□□ 0.61
LINC01555Q8NAE3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 RPS2P55-201ENST00000397318 883 ntBASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 AC107956.1-201ENST00000494359 873 ntBASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 AF186192.3-201ENST00000583427 947 ntBASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 TREX1-205ENST00000625293 1783 ntBASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LINC01555Q8NAE3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 AC012618.2-201ENST00000428058 849 ntBASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 AC233702.5-201ENST00000584107 538 ntBASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01555Q8NAE3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LINC01555Q8NAE3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms