Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 AC110285.6-201ENST00000617652 491 ntBASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 PTBP1P-201ENST00000554374 1601 ntBASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC71LQ8N9Z2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CYP21A1P-202ENST00000354927 1481 ntBASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC71LQ8N9Z2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 SUDS3P1-201ENST00000505831 966 ntBASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC71LQ8N9Z2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC71LQ8N9Z2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms