Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CNEP1R1Q8N9A8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 AC092667.1-201ENST00000434301 2586 ntBASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 KRT16P1-201ENST00000399124 1418 ntBASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 TSPY15P-201ENST00000457163 923 ntBASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNEP1R1Q8N9A8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNEP1R1Q8N9A8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.39■□□□□ 0.38
CNEP1R1Q8N9A8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 ECEL1P3-201ENST00000427961 737 ntBASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 C1QL1P1-201ENST00000568105 661 ntBASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNEP1R1Q8N9A8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC211429.1-201ENST00000415277 523 ntBASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 KRT18P16-201ENST00000510337 1294 ntBASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 NUDT16P1-203ENST00000513809 620 ntBASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 CLDN5-201ENST00000403084 2357 ntBASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNEP1R1Q8N9A8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.37■□□□□ 0.37
CNEP1R1Q8N9A8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNEP1R1Q8N9A8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.37■□□□□ 0.37
CNEP1R1Q8N9A8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNEP1R1Q8N9A8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms