Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DDX60Q8IY21 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 AC007663.1-201ENST00000438948 1240 ntBASIC24.27■■□□□ 1.48
DDX60Q8IY21 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX60Q8IY21 AL691432.2-201ENST00000607222 2038 ntBASIC24.26■■□□□ 1.47
DDX60Q8IY21 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.26■■□□□ 1.47
DDX60Q8IY21 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.26■■□□□ 1.47
DDX60Q8IY21 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 HMGA1P5-201ENST00000412453 271 ntBASIC24.26■■□□□ 1.47
DDX60Q8IY21 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.26■■□□□ 1.47
DDX60Q8IY21 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX60Q8IY21 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 KRT8P41-201ENST00000533985 1514 ntBASIC24.25■■□□□ 1.47
DDX60Q8IY21 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.25■■□□□ 1.47
DDX60Q8IY21 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX60Q8IY21 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 LINC01465-201ENST00000408887 1940 ntBASIC24.24■■□□□ 1.47
DDX60Q8IY21 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX60Q8IY21 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX60Q8IY21 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX60Q8IY21 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX60Q8IY21 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX60Q8IY21 AC117947.1-201ENST00000427448 529 ntBASIC24.23■■□□□ 1.47
DDX60Q8IY21 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX60Q8IY21 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
DDX60Q8IY21 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX60Q8IY21 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 LIN28AP1-201ENST00000429574 405 ntBASIC24.22■■□□□ 1.47
DDX60Q8IY21 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX60Q8IY21 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX60Q8IY21 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 AL160286.2-201ENST00000567150 934 ntBASIC24.21■■□□□ 1.47
DDX60Q8IY21 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX60Q8IY21 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.21■■□□□ 1.47
DDX60Q8IY21 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms