Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 AL050303.2-201ENST00000619798 666 ntBASIC19.95■□□□□ 0.78
CASC4Q6P4E1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.95■□□□□ 0.78
CASC4Q6P4E1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 AC018445.3-201ENST00000624177 1945 ntBASIC19.94■□□□□ 0.78
CASC4Q6P4E1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 GPX1P1-201ENST00000388829 606 ntBASIC19.94■□□□□ 0.78
CASC4Q6P4E1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.94■□□□□ 0.78
CASC4Q6P4E1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASC4Q6P4E1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.92■□□□□ 0.78
CASC4Q6P4E1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CASC4Q6P4E1 AC090340.1-201ENST00000620778 4980 ntBASIC19.91■□□□□ 0.78
CASC4Q6P4E1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms