Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.77■□□□□ 0.92
VARS2Q5ST30 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VARS2Q5ST30 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VARS2Q5ST30 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VARS2Q5ST30 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VARS2Q5ST30 RCC2P6-201ENST00000526625 1557 ntBASIC20.76■□□□□ 0.91
VARS2Q5ST30 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VARS2Q5ST30 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.75■□□□□ 0.91
VARS2Q5ST30 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AP005242.2-201ENST00000580065 1175 ntBASIC20.75■□□□□ 0.91
VARS2Q5ST30 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AC005363.2-201ENST00000618631 242 ntBASIC20.75■□□□□ 0.91
VARS2Q5ST30 AC130371.2-201ENST00000619443 611 ntBASIC20.75■□□□□ 0.91
VARS2Q5ST30 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VARS2Q5ST30 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 AC092667.1-201ENST00000434301 2586 ntBASIC20.75■□□□□ 0.91
VARS2Q5ST30 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARS2Q5ST30 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VARS2Q5ST30 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.74■□□□□ 0.91
VARS2Q5ST30 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.74■□□□□ 0.91
VARS2Q5ST30 AC097488.1-201ENST00000507834 756 ntBASIC20.74■□□□□ 0.91
VARS2Q5ST30 RN7SL850P-201ENST00000579959 291 ntBASIC20.74■□□□□ 0.91
VARS2Q5ST30 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
VARS2Q5ST30 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARS2Q5ST30 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 AC008040.2-201ENST00000461049 708 ntBASIC20.73■□□□□ 0.91
VARS2Q5ST30 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 AC011298.2-201ENST00000617989 482 ntBASIC20.73■□□□□ 0.91
VARS2Q5ST30 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
VARS2Q5ST30 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 KRT18P22-201ENST00000402024 1347 ntBASIC20.73■□□□□ 0.91
VARS2Q5ST30 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARS2Q5ST30 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VARS2Q5ST30 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARS2Q5ST30 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms