Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD11P31277 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HOXD11P31277 PTCD2P2-201ENST00000415579 1095 ntBASIC20.65■□□□□ 0.9
HOXD11P31277 VN1R21P-201ENST00000426703 765 ntBASIC20.65■□□□□ 0.9
HOXD11P31277 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXD11P31277 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXD11P31277 AL354696.1-201ENST00000614652 497 ntBASIC20.65■□□□□ 0.9
HOXD11P31277 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD11P31277 AC005393.1-201ENST00000617916 584 ntBASIC20.65■□□□□ 0.9
HOXD11P31277 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD11P31277 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD11P31277 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD11P31277 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD11P31277 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXD11P31277 OR5AQ1P-203ENST00000641818 1529 ntBASIC20.64■□□□□ 0.9
HOXD11P31277 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXD11P31277 RBM17P2-201ENST00000616397 1405 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 TAS2R1-201ENST00000382492 1359 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HOXD11P31277 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXD11P31277 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
HOXD11P31277 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXD11P31277 MTND2P18-201ENST00000419962 1030 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXD11P31277 Z83846.1-201ENST00000446798 265 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 AC119751.4-201ENST00000507498 357 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 AC011352.1-201ENST00000512300 793 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 AC008592.3-201ENST00000514941 418 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 AC140725.3-201ENST00000616193 880 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 CR769767.2-201ENST00000622735 460 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 AC093458.2-201ENST00000623150 629 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 AP003497.2-201ENST00000624220 967 ntBASIC20.64■□□□□ 0.89
HOXD11P31277 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXD11P31277 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXD11P31277 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXD11P31277 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXD11P31277 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXD11P31277 OR7E47P-201ENST00000546390 1422 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXD11P31277 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXD11P31277 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXD11P31277 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 AK4P3-201ENST00000418260 669 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 RNU2-45P-201ENST00000516068 187 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXD11P31277 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXD11P31277 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXD11P31277 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXD11P31277 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 AL589743.5-201ENST00000616611 1050 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 MIR6089-201ENST00000616698 64 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 AC120498.10-201ENST00000621827 505 ntBASIC20.63■□□□□ 0.89
HOXD11P31277 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXD11P31277 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXD11P31277 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXD11P31277 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HOXD11P31277 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXD11P31277 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXD11P31277 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HOXD11P31277 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXD11P31277 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXD11P31277 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXD11P31277 HSPA8P3-201ENST00000449300 780 ntBASIC20.62■□□□□ 0.89
HOXD11P31277 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXD11P31277 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXD11P31277 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXD11P31277 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms