Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMA1P25391 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LAMA1P25391 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 PCED1CP-201ENST00000419887 785 ntBASIC19.24■□□□□ 0.67
LAMA1P25391 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.24■□□□□ 0.67
LAMA1P25391 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMA1P25391 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMA1P25391 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
LAMA1P25391 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LAMA1P25391 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMA1P25391 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LAMA1P25391 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LAMA1P25391 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.24■□□□□ 0.67
LAMA1P25391 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LAMA1P25391 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA1P25391 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 AL671277.2-201ENST00000458060 996 ntBASIC19.23■□□□□ 0.67
LAMA1P25391 Z85996.1-201ENST00000494644 937 ntBASIC19.23■□□□□ 0.67
LAMA1P25391 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LAMA1P25391 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LAMA1P25391 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMA1P25391 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.23■□□□□ 0.67
LAMA1P25391 AL512604.3-201ENST00000569583 964 ntBASIC19.23■□□□□ 0.67
LAMA1P25391 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LAMA1P25391 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMA1P25391 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMA1P25391 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 AC008622.2-201ENST00000617006 1229 ntBASIC19.23■□□□□ 0.67
LAMA1P25391 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.23■□□□□ 0.67
LAMA1P25391 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA1P25391 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.22■□□□□ 0.67
LAMA1P25391 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 TSPY17P-201ENST00000450329 467 ntBASIC19.22■□□□□ 0.67
LAMA1P25391 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
LAMA1P25391 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.22■□□□□ 0.67
LAMA1P25391 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.22■□□□□ 0.67
LAMA1P25391 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LAMA1P25391 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.21■□□□□ 0.67
LAMA1P25391 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.21■□□□□ 0.67
LAMA1P25391 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.21■□□□□ 0.67
LAMA1P25391 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.21■□□□□ 0.67
LAMA1P25391 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.21■□□□□ 0.67
LAMA1P25391 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMA1P25391 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 AL137060.1-201ENST00000618151 2648 ntBASIC19.21■□□□□ 0.67
LAMA1P25391 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 YBX1P10-201ENST00000444752 975 ntBASIC19.21■□□□□ 0.67
LAMA1P25391 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 KRT8P17-201ENST00000453110 1448 ntBASIC19.21■□□□□ 0.67
LAMA1P25391 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LAMA1P25391 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LAMA1P25391 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.21■□□□□ 0.67
LAMA1P25391 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.21■□□□□ 0.67
LAMA1P25391 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LAMA1P25391 IER3-202ENST00000376377 1350 ntBASIC19.2■□□□□ 0.66
LAMA1P25391 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LAMA1P25391 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms