Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL050303.2-201ENST00000619798 666 ntBASIC18.84■□□□□ 0.61
CAPN3P20807 ITM2C-210ENST00000620962 501 ntBASIC18.84■□□□□ 0.61
CAPN3P20807 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CAPN3P20807 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CAPN3P20807 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.84■□□□□ 0.61
CAPN3P20807 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CAPN3P20807 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN3P20807 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CAPN3P20807 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CAPN3P20807 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
CAPN3P20807 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.83■□□□□ 0.6
CAPN3P20807 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CAPN3P20807 GUSBP6-202ENST00000438529 1198 ntBASIC18.83■□□□□ 0.6
CAPN3P20807 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.83■□□□□ 0.6
CAPN3P20807 AC008687.6-201ENST00000596318 630 ntBASIC18.83■□□□□ 0.6
CAPN3P20807 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CAPN3P20807 AP006294.2-201ENST00000641667 209 ntBASIC18.83■□□□□ 0.6
CAPN3P20807 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CAPN3P20807 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.83■□□□□ 0.6
CAPN3P20807 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CAPN3P20807 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CAPN3P20807 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CAPN3P20807 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
CAPN3P20807 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CAPN3P20807 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN3P20807 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 MCRIP2P1-201ENST00000394346 511 ntBASIC18.82■□□□□ 0.6
CAPN3P20807 KRT18P29-201ENST00000397031 1267 ntBASIC18.82■□□□□ 0.6
CAPN3P20807 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.82■□□□□ 0.6
CAPN3P20807 POU5F1P3-201ENST00000428824 1078 ntBASIC18.82■□□□□ 0.6
CAPN3P20807 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 AL138781.1-201ENST00000566567 1274 ntBASIC18.82■□□□□ 0.6
CAPN3P20807 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CAPN3P20807 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN3P20807 AC105020.6-201ENST00000621523 1217 ntBASIC18.82■□□□□ 0.6
CAPN3P20807 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CAPN3P20807 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN3P20807 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN3P20807 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN3P20807 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CAPN3P20807 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN3P20807 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.81■□□□□ 0.6
CAPN3P20807 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
CAPN3P20807 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CAPN3P20807 AC013268.1-206ENST00000638368 961 ntBASIC18.81■□□□□ 0.6
CAPN3P20807 AC112229.1-201ENST00000639295 961 ntBASIC18.81■□□□□ 0.6
CAPN3P20807 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN3P20807 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CAPN3P20807 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN3P20807 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN3P20807 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CAPN3P20807 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN3P20807 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN3P20807 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 RARRES2P4-201ENST00000514074 484 ntBASIC18.8■□□□□ 0.6
CAPN3P20807 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN3P20807 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CAPN3P20807 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN3P20807 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms