Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.67■■□□□ 1.22
ERCC3P19447 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.67■■□□□ 1.22
ERCC3P19447 MESTP1-201ENST00000404287 994 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.67■■□□□ 1.22
ERCC3P19447 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.67■■□□□ 1.22
ERCC3P19447 AL445675.2-201ENST00000620291 557 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 AL590326.2-201ENST00000625139 305 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 TFP1-202ENST00000475455 1573 ntBASIC22.67■■□□□ 1.22
ERCC3P19447 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ERCC3P19447 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ERCC3P19447 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ERCC3P19447 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.66■■□□□ 1.22
ERCC3P19447 TERF1P1-201ENST00000311003 1181 ntBASIC22.66■■□□□ 1.22
ERCC3P19447 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.66■■□□□ 1.22
ERCC3P19447 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.66■■□□□ 1.22
ERCC3P19447 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.66■■□□□ 1.22
ERCC3P19447 FEM1AP1-201ENST00000431297 1995 ntBASIC22.66■■□□□ 1.22
ERCC3P19447 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ERCC3P19447 AC073314.1-201ENST00000568729 2216 ntBASIC22.66■■□□□ 1.22
ERCC3P19447 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.66■■□□□ 1.22
ERCC3P19447 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
ERCC3P19447 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
ERCC3P19447 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.66■■□□□ 1.22
ERCC3P19447 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 AL137013.1-201ENST00000432946 1228 ntBASIC22.65■■□□□ 1.22
ERCC3P19447 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.65■■□□□ 1.22
ERCC3P19447 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.65■■□□□ 1.22
ERCC3P19447 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 FSCN1P1-201ENST00000568912 1481 ntBASIC22.65■■□□□ 1.22
ERCC3P19447 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.65■■□□□ 1.22
ERCC3P19447 AC073508.3-201ENST00000619697 1419 ntBASIC22.65■■□□□ 1.22
ERCC3P19447 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ERCC3P19447 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ERCC3P19447 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ERCC3P19447 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ERCC3P19447 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ERCC3P19447 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
ERCC3P19447 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
ERCC3P19447 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ERCC3P19447 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.64■■□□□ 1.21
ERCC3P19447 SLC25A3P1-201ENST00000443844 931 ntBASIC22.64■■□□□ 1.21
ERCC3P19447 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.64■■□□□ 1.21
ERCC3P19447 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
ERCC3P19447 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
ERCC3P19447 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.64■■□□□ 1.21
ERCC3P19447 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.64■■□□□ 1.21
ERCC3P19447 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ERCC3P19447 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
ERCC3P19447 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ERCC3P19447 KRT16P6-202ENST00000425692 1426 ntBASIC22.64■■□□□ 1.21
ERCC3P19447 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
ERCC3P19447 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ERCC3P19447 AC007225.1-201ENST00000566331 1836 ntBASIC22.64■■□□□ 1.21
ERCC3P19447 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.63■■□□□ 1.21
ERCC3P19447 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.63■■□□□ 1.21
ERCC3P19447 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.63■■□□□ 1.21
ERCC3P19447 AC018553.1-201ENST00000616682 1458 ntBASIC22.63■■□□□ 1.21
ERCC3P19447 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.63■■□□□ 1.21
ERCC3P19447 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.63■■□□□ 1.21
ERCC3P19447 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.63■■□□□ 1.21
ERCC3P19447 AC026271.3-201ENST00000571884 352 ntBASIC22.63■■□□□ 1.21
ERCC3P19447 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.63■■□□□ 1.21
ERCC3P19447 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ERCC3P19447 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
ERCC3P19447 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.62■■□□□ 1.21
ERCC3P19447 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ERCC3P19447 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ERCC3P19447 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms